Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015947656.1_cds_XP_016489243.1_79789
CDS Infomation

[gene=LOC107809163] [db_xref=GeneID:107809163] [protein=serine/threonine-protein kinase tricorner-like] [protein_id=XP_016489243.1] [location=complement(join(15925..16016,16090..16140,16298..16382,17384..17431,19580..19693,19781..19912,20486..20570,21812..21891,23432..23675,23848..24089,28240..28323,31150..31324,33245..33381))] [gbkey=CDS]
Sequence

ATGGAGGAAGAAGGGAAGAGAGAAGAGGAGGTGGTAATTGGATCAAGGTTGACAATGGAG
AAAGTAGCTGCTGCTAAGCAATTTATTGAGAATCACTACAAGACCCACATCAACACTATT
CAACAACGCAAACAGAGGCGTTGGATTCTAGAAAGAAAGTTAGCATCTTCGGATGTGCCT
AAAGAAGAGCAAATGCATCTGATCAAAGATCTAGAGCAAAAGGAGACAGAGTATATGAGA
CTAAGGAGGCACAAAATATGCGTGGATGATTTTGAACTTCTTACAATTATTGGCAGAGGA
GCCTATGGCGAGGTAAGATTATGCAGGGAGAAGAAATCTGGCAACATTTATGCCATGAAG
AAGTTAAAGAAATCTGAAATGCTCATCAAAGGACAGGTGGAGCATGTGAGAGCGGAAAGA
AATTTATTGGCGGAAGTGGCCAGCCATTGCATTGTAAAATTATACTACTCATTCCAAGAT
GCTGAATATCTTTATCTTATCATGGAGTATCTTCCTGGCGGTGACATGATGACTCTGCTC
ATTAGAGAAGACACATTGTCTGAAAGTGTAGCTAAATTTTATATTGCGCAGACTGTCCTA
GCTATAGAGTCCATTCACAAGCATAATTACATTCACAGAGATATCAAACCTGACAACCTT
CTTTTGGACAAAAATGGTCACATGAAGCTCTCTGATTTTGGTCTCTGTAAGCCTCTTGAT
TGTAGAACTTTATCCACGTTGAAAGAAAATGAAACTATGGATGATGAGAATAGAGATGAT
CCTATGGATATAGATAGCAGCTTCCCAGATTCCCGTGACGGAAGTAAGTGGAAAAGTCCC
CGTGAACAACTTCATCATTGGCAGATGAACAGGAGGAAATTGGCATTTTCAACAGTCGGT
ACGCCAGACTATATTGCTCCTGAGGTACTATTGAAGAAGGGATATGGGATGGAATGCGAT
TGGTGGTCCCTTGGTGCAATTTTGTACGAAATGCTCATTGGTTACCCTCCATTCTACGCT
GATGATCCAATAACTACTTGCAGAAAGATAGTTCACTGGAGAAATCAGCTAAAATTTCCT
GAAGAGGCCAAACTCTCCCACGAGGCAAAGGATCTTATCTGCAGGTTACTATGTGATGTT
GAACATAGACTGGGCACTGGAGGTTCAAACCAAATAAAGGCTCATCCTTGGTTCAAGCAT
ATTGTATGGGATAAGCTGTATGAAATGGAAGCAGCCTTCAAGCCAGAAGTTAATGGAGAG
CTGGACACCCAGAATTTTATGAAGTTTGATGAGATGGTTACTACATCATCAGCAAGATCC
GGTTCGGGACCTTCTCGGAAGATGTTATTAACTCCCAAAGATTTAAGTTTTGTGGGCTAT
ACATACAAAAACTTCGACGCTGTCAAGGCACTACGCAACTCTCCTGATCTTACAAGGGAC
ACATCACCTAGACGACCATCTATTGATTCCATATTCAGTGATTCTACGGACTATCCTGCA
AGAAAAGGAAGAGCTGGAGATCTAGATACGGAGATGATAACATCTACTGGTAATGCAATA
TCTCCATGA

Peptide Sequence

PEP ID

XP_016489243.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase tricorner-like [Nicotiana tabacum]
Sequence

MEEEGKREEEVVIGSRLTMEKVAAAKQFIENHYKTHINTIQQRKQRRWILERKLASSDVP
KEEQMHLIKDLEQKETEYMRLRRHKICVDDFELLTIIGRGAYGEVRLCREKKSGNIYAMK
KLKKSEMLIKGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLL
IREDTLSESVAKFYIAQTVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLD
CRTLSTLKENETMDDENRDDPMDIDSSFPDSRDGSKWKSPREQLHHWQMNRRKLAFSTVG
TPDYIAPEVLLKKGYGMECDWWSLGAILYEMLIGYPPFYADDPITTCRKIVHWRNQLKFP
EEAKLSHEAKDLICRLLCDVEHRLGTGGSNQIKAHPWFKHIVWDKLYEMEAAFKPEVNGE
LDTQNFMKFDEMVTTSSARSGSGPSRKMLLTPKDLSFVGYTYKNFDAVKALRNSPDLTRD
TSPRRPSIDSIFSDSTDYPARKGRAGDLDTEMITSTGNAISP

Transcript Sequence

Gene sequence data has not been registered.